USC-OGP 2-DE database Two-dimensional polyacrylamide gel electrophoresis database

USC-OGP 2-DE database  Search by                Maps             Select Remote Interfaces [All Interfaces] SWISS-2DPAGE World-2DPAGE Portal World-2DPAGE Repository Exclude local DBs has only effect if a remote interface is selected

Searching in 'USC-OGP 2-DE database' for entry matching: EFTS_HUMAN USC-OGP 2-DE database:  EFTS_HUMAN EFTS_HUMAN General information about the entry View entry in simple text format Entry name EFTS_HUMAN Primary accession number P43897 integrated into USC-OGP 2-DE database on  January 17, 2017 (release 1) 2D Annotations were last modified on January 17, 2017 (version 1) General Annotations were last modified on  April 5, 2017 (version 2) Name and origin of the protein Description RecName: Full=Elongation factor Ts, mitochondrial {ECO:0000255|HAMAP-Rule:MF_03135}; Short=EF-Ts {ECO:0000255|HAMAP-Rule:MF_03135}; Short=EF-TsMt {ECO:0000255|HAMAP-Rule:MF_03135}; Flags: Precursor;. Gene name Name=TSFM {ECO:0000255|HAMAP-Rule:MF_03135} Annotated species Homo sapiens (Human) [TaxID: 9606] Taxonomy Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo. References [1]   2D GEL CHARACTERIZATION Author 1., Author 2. Submitted (Mar-2011) to Current 2D PAGE maps for identified proteins How to interpret a protein UVEAL_MELANOMA_3-10 {UVEAL MELANOMA 3-10} Homo sapiens (Human)   map experimental info   UVEAL_MELANOMA_3-10 MAP LOCATIONS: SPOT OGP-1249: pI=6.60; Mw=31413 Cross-references UniProtKB/Swiss-Prot P43897; EFTS_HUMAN. 2D PAGE maps for identified proteins How to interpret a protein map You may obtain an estimated location of the protein on various 2D PAGE maps, provided the whole amino acid sequence is known. The estimation is obtained according to the computed protein's pI and Mw. Warning 1: the displayed region reflects an area around the theoretical pI and molecular weight of the protein and is only provided for the user's information. It should be used with caution, as the experimental and theoretical positions of a protein may differ significantly. Warning 2: the 2D PAGE map is built on demand. This may take some few seconds to be computed. External data extracted from UniProtKB/Swiss-Prot Extracted from UniProtKB/Swiss-Prot, release: 0.0 Entry name EFTS_HUMAN Primary accession number P43897 Secondary accession number(s) B4E391 F5H2T7 Q561V7 Q8TBC2 Q9UQK0 Sequence was last modified on  January 11, 2001 (version 2) Annotations were last modified on  March 15, 2017 (version 171) Name and origin of the protein Description RecName: Full=Elongation factor Ts, mitochondrial {ECO:0000255|HAMAP-Rule:MF_03135}; Short=EF-Ts {ECO:0000255|HAMAP-Rule:MF_03135}; Short=EF-TsMt {ECO:0000255|HAMAP-Rule:MF_03135}; Flags: Precursor; Gene name Name=TSFM {ECO:0000255|HAMAP-Rule:MF_03135} Encoded on Name=TSFM {ECO:0000255|HAMAP-Rule:MF_03135 Keywords 3D-structure; Alternative splicing; Cardiomyopathy; Complete proteome; Disease mutation; Elongation factor; Mitochondrion; Phosphoprotein; Protein biosynthesis; Reference proteome; Transit peptide. Copyright Copyrighted by the UniProt Consortium, see http://www.uniprot.org/help/license. Distributed under the Creative Commons Attribution-NoDerivs License Cross-references EMBL AF110399; AAD20224.1; -; mRNA EMBL AK304621; BAG65403.1; -; mRNA EMBL AK308981; -; NOT_ANNOTATED_CDS; mRNA EMBL AC025165; -; NOT_ANNOTATED_CDS; Genomic_DNA EMBL CH471054; EAW97075.1; -; Genomic_DNA EMBL BC022862; AAH22862.1; -; mRNA EMBL BC093068; AAH93068.1; -; mRNA EMBL L37936; AAC37577.1; -; mRNA CCDS CCDS53809.1; -. [P43897-2]; . CCDS CCDS53810.1; -. [P43897-4]; . CCDS CCDS53811.1; -. [P43897-3]; . CCDS CCDS8958.2; -. [P43897-1]; . PIR I84606; I84606; . RefSeq NP_001166166.1; NM_001172695.1. [P43897-3]; . RefSeq NP_001166167.1; NM_001172696.1. [P43897-2]; . RefSeq NP_001166168.1; NM_001172697.1. [P43897-4]; . RefSeq NP_005717.3; NM_005726.5. [P43897-1]; . UniGene Hs.632704; -; . PDB 2CP9; NMR; -; A=45-95 PDBsum 2CP9; -; . ProteinModelPortal P43897; -; . SMR P43897; -; . BioGrid 115409; 26; . IntAct P43897; 13; . MINT MINT-3297563; -; . iPTMnet P43897; -; . PhosphoSitePlus P43897; -; . BioMuta TSFM; -; . DMDM 12644268; -; . EPD P43897; -; . MaxQB P43897; -; . PeptideAtlas P43897; -; . PRIDE P43897; -; . Ensembl ENST00000323833; ENSP00000313877; ENSG00000123297. [P43897-2]; . Ensembl ENST00000454289; ENSP00000388330; ENSG00000123297. [P43897-1]; . Ensembl ENST00000540550; ENSP00000440987; ENSG00000123297. [P43897-3]; . Ensembl ENST00000543727; ENSP00000439342; ENSG00000123297. [P43897-4]; . GeneID 10102; -; . KEGG hsa:10102; -; . UCSC uc001sqh.4; human. [P43897-1]; . CTD 10102; -; . DisGeNET 10102; -; . GeneCards TSFM; -; . HGNC HGNC:12367; TSFM; . HPA HPA006204; -; . MalaCards TSFM; -; . MIM 604723; gene; . MIM 610505; phenotype; . neXtProt NX_P43897; -; . OpenTargets ENSG00000123297; -; . Orphanet 168566; Fatal mitochondrial disease due to combined oxidative phosphorylation deficiency 3; . PharmGKB PA37037; -; . GeneTree ENSGT00390000016293; -; . HOGENOM HOG000220988; -; . HOVERGEN HBG005571; -; . InParanoid P43897; -; . KO K02357; -; . OMA LVICETS; -; . OrthoDB EOG091G0E11; -; . PhylomeDB P43897; -; . TreeFam TF314154; -; . Reactome R-HSA-5389840; Mitochondrial translation elongation; . EvolutionaryTrace P43897; -; . GeneWiki TSFM; -; . GenomeRNAi 10102; -; . PRO PR:P43897; -; . Proteomes UP000005640; Chromosome 12; . Bgee ENSG00000123297; -; . CleanEx HS_TSFM; -; . ExpressionAtlas P43897; baseline and differential; . Genevisible P43897; HS; . GO GO:0005759; C:mitochondrial matrix; IBA:GO_Central; . GO GO:0005739; C:mitochondrion; IDA:HPA; . GO GO:0005634; C:nucleus; IDA:HPA; . GO GO:0003723; F:RNA binding; IDA:UniProtKB; . GO GO:0003746; F:translation elongation factor activity; IBA:GO_Central; . GO GO:0070125; P:mitochondrial translational elongation; IBA:GO_Central; . GO GO:0032784; P:regulation of DNA-templated transcription; elongation; TAS:ProtInc GO GO:0070129; P:regulation of mitochondrial translation; IDA:UniProtKB; . GO GO:0006414; P:translational elongation; TAS:ProtInc; . Gene3D 3.30.479.20; -; 2; . HAMAP MF_00050; EF_Ts; 1; . InterPro IPR001816; Transl_elong_EFTs/EF1B; . InterPro IPR014039; Transl_elong_EFTs/EF1B_dimer; . InterPro IPR018101; Transl_elong_Ts_CS; . InterPro IPR009060; UBA-like; . PANTHER PTHR11741; PTHR11741; 1; . Pfam PF00889; EF_TS; 1; . SUPFAM SSF46934; SSF46934; 1; . SUPFAM SSF54713; SSF54713; 2; . PROSITE PS01126; EF_TS_1; 1; . PROSITE PS01127; EF_TS_2; 1; .

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• SWISS-2DPAGE - The Geneva Two-dimensional polyacrylamide gel electrophoresis database.
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